Rhodococcus sp. PAMC28707

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28707 is characterized by the presence of flagella, indicating its motility, which is a significant trait for various ecological interactions and adaptations. This strain possesses a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and maintenance of genetic material. Its genomic data can be referenced under the accession number NZ_CP039253.1, which provides a basis for further studies into its genetic and biochemical properties. The motility conferred by flagella may play a crucial role in the ecological niches that Rhodococcus sp. PAMC28707 occupies, allowing it to navigate and respond to environmental stimuli effectively. This trait can be particularly advantageous in fluctuating habitats where the availability of nutrients or other resources may change. In summary, the combination of flagella presence and the single replicon structure in Rhodococcus sp. PAMC28707 suggests a potentially versatile organism capable of adapting to various environments, which may have implications for its role in biogeochemical cycles or bioremediation processes. Further research could elucidate the ecological significance of these traits in natural and engineered systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28707
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28707 chromosome, complete genome.

Gene Summary

Adenine Count

900107 bp

Thymine Count

892804 bp

Guanine Count

1467089 bp

Cytosine Count

1467363 bp

Genome Length

4727363 bp

Protein-coding Genes

4286 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseE5720_RS09120Not AvailablePositive2010756 - 201158329350.4
fad-dependent oxidoreductaseE5720_RS09125Not AvailablePositive2011630 - 201304851704.7
amp-dependent synthetase/ligaseE5720_RS09130Not AvailablePositive2013178 - 201496564240.2
4-hydroxy-tetrahydrodipicolinate synthaseE5720_RS09135Not AvailableNegative2014946 - 201590532948.7
lysr family transcriptional regulatorE5720_RS09140Not AvailablePositive2015980 - 201687032088.0
lipopolysaccharide assembly protein lapa domain-containing proteinE5720_RS09145Not AvailableNegative2016882 - 201717810576.0
hypothetical proteinE5720_RS09150Not AvailableNegative2017296 - 201767013393.6
amp-binding proteinE5720_RS09155Not AvailableNegative2017856 - 201946958113.1
duf2945 domain-containing proteinE5720_RS09160Not AvailableNegative2019768 - 20199777796.07
sdr family oxidoreductaseE5720_RS09165Not AvailableNegative2020190 - 20204388992.55

Displaying genes 1841 – 1850 of 4347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.