Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PF9285 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain PF9285 chromosome, complete genome.
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator fis | E5M00_RS02875 | Not Available | Negative | 570215 - 570511 | 11240.6 |
| trna dihydrouridine synthase dusb | E5M00_RS02880 | Not Available | Negative | 570537 - 571502 | 35868.2 |
| 50s ribosomal protein l11 methyltransferase | E5M00_RS02885 | Not Available | Negative | 571831 - 572712 | 31878.8 |
| sodium/pantothenate symporter | E5M00_RS02890 | Not Available | Negative | 572724 - 574175 | 51720.3 |
| yhdt family protein | E5M00_RS02895 | Not Available | Negative | 574165 - 574407 | 9098.24 |
| acetyl-coa carboxylase biotin carboxylase subunit | E5M00_RS02900 | Not Available | Negative | 574516 - 575865 | 49323.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | E5M00_RS02905 | Not Available | Negative | 575876 - 576346 | 16688.2 |
| mdr family oxidoreductase | E5M00_RS02910 | Not Available | Negative | 577332 - 578306 | 34725.8 |
| rnase e specificity factor csrd | E5M00_RS02915 | Not Available | Positive | 578458 - 580398 | 73343.7 |
| rod shape-determining protein mreb | E5M00_RS02925 | Not Available | Positive | 580703 - 581746 | 36954.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





