Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PF9285 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain PF9285 chromosome, complete genome.
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspj | E5M00_RS02525 | Not Available | Negative | 518848 - 519435 | 22232.5 |
| type ii secretion system minor pseudopilin gspi | E5M00_RS02530 | Not Available | Negative | 519428 - 519805 | 13902.2 |
| type ii secretion system minor pseudopilin gsph | E5M00_RS02535 | Not Available | Negative | 519802 - 520311 | 18566.1 |
| type ii secretion system major pseudopilin gspg | E5M00_RS02540 | Not Available | Negative | 520319 - 520756 | 15906.1 |
| type ii secretion system inner membrane protein gspf | E5M00_RS02545 | Not Available | Negative | 520766 - 521962 | 44341.9 |
| type ii secretion system atpase gspe | E5M00_RS02550 | Not Available | Negative | 521959 - 523440 | 54660.0 |
| type ii secretion system secretin gspd | E5M00_RS02555 | Not Available | Negative | 523450 - 525402 | 70702.2 |
| type ii secretion system protein gspc | E5M00_RS02560 | Not Available | Negative | 525386 - 526201 | 30039.9 |
| type ii secretion system protein gspa | E5M00_RS02565 | Not Available | Positive | 526381 - 527850 | 55301.1 |
| putative general secretion pathway protein gspb | E5M00_RS02570 | Not Available | Positive | 527852 - 528271 | 15876.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





