Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PF9285 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain PF9285 chromosome, complete genome.
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination-promoting nuclease rpna | E5M00_RS02120 | Not Available | Negative | 437734 - 438612 | 33255.3 |
| [fe-s]-dependent transcriptional repressor feoc | E5M00_RS02125 | Not Available | Negative | 438815 - 439051 | 8660.66 |
| fe(2+) transporter permease subunit feob | E5M00_RS02130 | Not Available | Negative | 439051 - 441372 | 84464.7 |
| ferrous iron transporter a | E5M00_RS02135 | Not Available | Negative | 441389 - 441616 | 8371.31 |
| tex family protein | E5M00_RS02140 | Not Available | Negative | 442073 - 444394 | 85076.6 |
| transcription elongation factor greb | E5M00_RS02145 | Not Available | Negative | 444491 - 444967 | 18528.0 |
| two-component system response regulator ompr | E5M00_RS02150 | Not Available | Positive | 445195 - 445914 | 27355.3 |
| two-component system sensor histidine kinase envz | E5M00_RS02155 | Not Available | Positive | 445911 - 447263 | 50337.1 |
| phosphoenolpyruvate carboxykinase (atp) | E5M00_RS02160 | Not Available | Negative | 447339 - 448961 | 59646.7 |
| duf4153 domain-containing protein | E5M00_RS02165 | Not Available | Positive | 449340 - 451064 | 64612.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





