Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PF9285 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain PF9285 chromosome, complete genome.
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| barstar family protein | E5M00_RS02980 | Not Available | Positive | 595661 - 595933 | 10796.7 |
| peroxide/acid stress response protein yhcn | E5M00_RS02985 | Not Available | Negative | 595989 - 596252 | 9196.89 |
| transcriptional regulator argr | E5M00_RS02990 | Not Available | Negative | 596617 - 597087 | 16995.5 |
| malate dehydrogenase | E5M00_RS02995 | Not Available | Positive | 597522 - 598460 | 32339.2 |
| outer membrane-stress sensor serine endopeptidase degs | E5M00_RS03000 | Not Available | Negative | 598523 - 599590 | 37583.4 |
| serine endoprotease degq | E5M00_RS03005 | Not Available | Negative | 599680 - 601047 | 47207.9 |
| z-ring associated protein zapg | E5M00_RS03010 | Not Available | Negative | 601201 - 601599 | 14961.7 |
| cell division protein zape | E5M00_RS03015 | Not Available | Positive | 601793 - 602920 | 43066.0 |
| 50s ribosomal protein l13 | E5M00_RS03020 | Not Available | Positive | 603139 - 603567 | 16019.5 |
| 30s ribosomal protein s9 | E5M00_RS03025 | Not Available | Positive | 603583 - 603975 | 14857.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





