Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PF9285 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain PF9285 chromosome, complete genome.
Gene Summary
Adenine Count
1281848 bp
Thymine Count
1289705 bp
Guanine Count
1334188 bp
Cytosine Count
1309821 bp
Genome Length
5215562 bp
Protein-coding Genes
4670 genes
Non-Coding Genes
494 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | E5M00_RS02930 | Not Available | Positive | 581812 - 582915 | 39532.8 |
| rod shape-determining protein mred | E5M00_RS02935 | Not Available | Positive | 582915 - 583403 | 18788.9 |
| nucleoside triphosphate pyrophosphatase yhde | E5M00_RS02940 | Not Available | Positive | 583412 - 584005 | 21516.7 |
| ribonuclease g | E5M00_RS02945 | Not Available | Positive | 583995 - 585464 | 55367.4 |
| asma2 domain-containing protein yhdp | E5M00_RS02950 | Not Available | Positive | 585532 - 589332 | 139049.0 |
| metalloprotease tldd | E5M00_RS02955 | Not Available | Positive | 589762 - 591207 | 51367.2 |
| hth-type transcriptional activator aaer | E5M00_RS02960 | Not Available | Negative | 591341 - 592270 | 34518.1 |
| p-hydroxybenzoic acid efflux pump operon protein aaex | E5M00_RS02965 | Not Available | Positive | 592453 - 592656 | 7847.01 |
| p-hydroxybenzoic acid efflux pump subunit aaea | E5M00_RS02970 | Not Available | Positive | 592664 - 593596 | 34776.5 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | E5M00_RS02975 | Not Available | Positive | 593602 - 595569 | 73591.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





