Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Microbacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Microbacterium |
| Species | Microbacterium sediminis |
| Strain | strain YLB-01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Microbacterium sediminis strain YLB-01 Scaffold9_1, whole genome
Gene Summary
Adenine Count
386383 bp
Thymine Count
389502 bp
Guanine Count
989527 bp
Cytosine Count
994549 bp
Genome Length
2759961 bp
Protein-coding Genes
2529 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | A7J15_00315 | Not Available | Positive | 484015 - 484722 | 23551.6 |
| branched-chain amino acid transporter azld | A7J15_00320 | Not Available | Positive | 484719 - 485033 | 10779.6 |
| hypothetical protein | A7J15_00325 | Not Available | Positive | 485060 - 485491 | 14280.8 |
| ferredoxin | A7J15_00330 | P13279 | Positive | 485501 - 485827 | 11879.9 |
| succinyldiaminopimelate transaminase | A7J15_00335 | Q3S8P9 | Positive | 485835 - 486947 | 39729.1 |
| citrate (si)-synthase | A7J15_00340 | P9WPD4 | Positive | 487070 - 488350 | 47287.4 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | A7J15_00345 | C5CBB6 | Negative | 488417 - 489340 | 32041.2 |
| succinyl-diaminopimelate desuccinylase | A7J15_00350 | A0R2G4 | Positive | 489413 - 490486 | 38418.3 |
| hypothetical protein | A7J15_00355 | Not Available | Positive | 490493 - 491686 | 43614.9 |
| hypothetical protein | A7J15_00360 | Not Available | Positive | 491736 - 491972 | 8204.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
