Flavobacterium nackdongense strain GS13

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium nackdongense strain GS13 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that is often associated with certain bacterial adaptations. The strain is documented under the accession NZ_CP037933.1, which allows for further investigation into its genetic makeup and potential functionalities. In terms of ecological significance, members of the Flavobacterium genus are frequently found in aquatic environments, where they play essential roles in the degradation of organic matter. This degradation process is crucial for nutrient cycling and can impact the overall health of the ecosystem. Given the characteristics of Flavobacterium nackdongense strain GS13, its motility may enhance its ability to colonize various niches within its habitat, potentially leading to increased interactions with other microorganisms. Such interactions could influence microbial community dynamics and contribute to the biogeochemical processes within aquatic ecosystems. Overall, the unique traits of Flavobacterium nackdongense strain GS13 underscore its potential role in environmental microbiology and highlight the importance of studying diverse microbial species to understand their contributions to ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium nackdongense
Strainstrain GS13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium nackdongense strain GS13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium nackdongense strain GS13 chromosome, complete

Gene Summary

Adenine Count

1355635 bp

Thymine Count

1334976 bp

Guanine Count

773471 bp

Cytosine Count

753145 bp

Genome Length

4217227 bp

Protein-coding Genes

3484 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hybrid sensor histidine kinase/response regulator transcription factorE1750_RS03280Not AvailableNegative829888 - 833991157228.0
aldose epimerase family proteinE1750_RS03285Not AvailableNegative834263 - 83540242467.5
glycoside hydrolase family 88 proteinE1750_RS03290Not AvailableNegative835426 - 83661044897.4
t9ss type a sorting domain-containing proteinE1750_RS03295Not AvailableNegative836749 - 83850059860.4
t9ss type a sorting domain-containing proteinE1750_RS03300Not AvailableNegative838527 - 842039127255.0
heparinase ii/iii family proteinE1750_RS03305Not AvailableNegative842339 - 847171172869.0
t9ss type a sorting domain-containing proteinE1750_RS03310Not AvailableNegative847407 - 84926967684.4
omph family outer membrane proteinE1750_RS03315Not AvailableNegative849400 - 8495857106.75
hypothetical proteinE1750_RS03320Not AvailableNegative849620 - 85128456011.6
hypothetical proteinE1750_RS03325Not AvailableNegative851909 - 85242119967.9

Displaying genes 661 – 670 of 3543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.