Flavobacterium nackdongense strain GS13

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium nackdongense strain GS13 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that is often associated with certain bacterial adaptations. The strain is documented under the accession NZ_CP037933.1, which allows for further investigation into its genetic makeup and potential functionalities. In terms of ecological significance, members of the Flavobacterium genus are frequently found in aquatic environments, where they play essential roles in the degradation of organic matter. This degradation process is crucial for nutrient cycling and can impact the overall health of the ecosystem. Given the characteristics of Flavobacterium nackdongense strain GS13, its motility may enhance its ability to colonize various niches within its habitat, potentially leading to increased interactions with other microorganisms. Such interactions could influence microbial community dynamics and contribute to the biogeochemical processes within aquatic ecosystems. Overall, the unique traits of Flavobacterium nackdongense strain GS13 underscore its potential role in environmental microbiology and highlight the importance of studying diverse microbial species to understand their contributions to ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium nackdongense
Strainstrain GS13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium nackdongense strain GS13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium nackdongense strain GS13 chromosome, complete

Gene Summary

Adenine Count

1355635 bp

Thymine Count

1334976 bp

Guanine Count

773471 bp

Cytosine Count

753145 bp

Genome Length

4217227 bp

Protein-coding Genes

3484 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alanine dehydrogenaseE1750_RS01540Not AvailableNegative399803 - 40099643638.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeE1750_RS01545Not AvailableNegative401263 - 40167015336.4
bifunctional response regulator/alkaline phosphatase family proteinE1750_RS01550Not AvailableNegative401767 - 40334760991.3
toxin-antitoxin system ywqk family antitoxinE1750_RS01555Not AvailablePositive403839 - 40498743967.5
hypothetical proteinE1750_RS01560Not AvailablePositive405131 - 40599433070.6
rdd family proteinE1750_RS01565Not AvailablePositive406004 - 40639615091.1
voc family proteinE1750_RS01570Not AvailablePositive406650 - 40708716389.5
hd domain-containing proteinE1750_RS01575Not AvailablePositive407373 - 40860247482.0
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseE1750_RS01580Not AvailablePositive408733 - 40977937410.6
bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydrataseE1750_RS01585Not AvailablePositive409772 - 41116051255.5

Displaying genes 311 – 320 of 3543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.