Flavobacterium nackdongense strain GS13

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium nackdongense strain GS13 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that is often associated with certain bacterial adaptations. The strain is documented under the accession NZ_CP037933.1, which allows for further investigation into its genetic makeup and potential functionalities. In terms of ecological significance, members of the Flavobacterium genus are frequently found in aquatic environments, where they play essential roles in the degradation of organic matter. This degradation process is crucial for nutrient cycling and can impact the overall health of the ecosystem. Given the characteristics of Flavobacterium nackdongense strain GS13, its motility may enhance its ability to colonize various niches within its habitat, potentially leading to increased interactions with other microorganisms. Such interactions could influence microbial community dynamics and contribute to the biogeochemical processes within aquatic ecosystems. Overall, the unique traits of Flavobacterium nackdongense strain GS13 underscore its potential role in environmental microbiology and highlight the importance of studying diverse microbial species to understand their contributions to ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium nackdongense
Strainstrain GS13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium nackdongense strain GS13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium nackdongense strain GS13 chromosome, complete

Gene Summary

Adenine Count

1355635 bp

Thymine Count

1334976 bp

Guanine Count

773471 bp

Cytosine Count

753145 bp

Genome Length

4217227 bp

Protein-coding Genes

3484 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radc family proteinE1750_RS14425Not AvailablePositive3369904 - 337059625217.6
yjjg family noncanonical pyrimidine nucleotidaseE1750_RS14430Not AvailablePositive3370609 - 337129526721.0
hypothetical proteinE1750_RS14435Not AvailablePositive3371298 - 337213130668.9
replication-associated recombination protein aE1750_RS14440Not AvailableNegative3372305 - 337358247360.6
rhomboid family intramembrane serine proteaseE1750_RS14445Not AvailablePositive3373825 - 337454728025.7
uma2 family endonucleaseE1750_RS14450Not AvailablePositive3374584 - 337518322863.7
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbE1750_RS14455Not AvailableNegative3375334 - 337606826371.2
t9ss-dependent m36 family metallopeptidaseE1750_RS14460Not AvailablePositive3376556 - 337930399678.4
susd/ragb family nutrient-binding outer membrane lipoproteinE1750_RS14465Not AvailableNegative3379808 - 338136756758.2
susc/raga family tonb-linked outer membrane proteinE1750_RS14470Not AvailableNegative3381389 - 3384577114717.0

Displaying genes 2891 – 2900 of 3543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.