Flavobacterium nackdongense strain GS13

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium nackdongense strain GS13 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that is often associated with certain bacterial adaptations. The strain is documented under the accession NZ_CP037933.1, which allows for further investigation into its genetic makeup and potential functionalities. In terms of ecological significance, members of the Flavobacterium genus are frequently found in aquatic environments, where they play essential roles in the degradation of organic matter. This degradation process is crucial for nutrient cycling and can impact the overall health of the ecosystem. Given the characteristics of Flavobacterium nackdongense strain GS13, its motility may enhance its ability to colonize various niches within its habitat, potentially leading to increased interactions with other microorganisms. Such interactions could influence microbial community dynamics and contribute to the biogeochemical processes within aquatic ecosystems. Overall, the unique traits of Flavobacterium nackdongense strain GS13 underscore its potential role in environmental microbiology and highlight the importance of studying diverse microbial species to understand their contributions to ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium nackdongense
Strainstrain GS13

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium nackdongense strain GS13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium nackdongense strain GS13 chromosome, complete

Gene Summary

Adenine Count

1355635 bp

Thymine Count

1334976 bp

Guanine Count

773471 bp

Cytosine Count

753145 bp

Genome Length

4217227 bp

Protein-coding Genes

3484 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicase family proteinE1750_RS13475Not AvailableNegative3152933 - 3155635103066.0
laci family dna-binding transcriptional regulatorE1750_RS13480Not AvailableNegative3156017 - 315704537999.4
5-dehydro-4-deoxy-d-glucuronate isomeraseE1750_RS13485Not AvailablePositive3157199 - 315803831334.3
gluconate 5-dehydrogenaseE1750_RS13490Not AvailablePositive3158069 - 315886327956.7
duf4861 family proteinE1750_RS13495Not AvailablePositive3159105 - 316030144797.7
gntr family transcriptional regulatorE1750_RS13500Not AvailablePositive3160614 - 316161538870.5
glycoside hydrolase family 30 proteinE1750_RS13505Not AvailablePositive3161680 - 316309554149.4
xylulokinaseE1750_RS13510Not AvailablePositive3163123 - 316460754501.0
xylose isomeraseE1750_RS13515Not AvailablePositive3164615 - 316594049204.8
transketolase family proteinE1750_RS13520Not AvailablePositive3166250 - 316828973411.1

Displaying genes 2701 – 2710 of 3543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.