Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | 5a M90T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1126769 bp
Thymine Count
1129426 bp
Guanine Count
1172825 bp
Cytosine Count
1167694 bp
Genome Length
4596714 bp
Protein-coding Genes
4189 genes
Non-Coding Genes
487 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EKN05_RS23520 | Not Available | Positive | 10493 - 10966 | 17983.9 |
| is5-like element issfl7 family transposase | EKN05_RS23525 | Not Available | Positive | 11055 - 11920 | 32254.8 |
| hypothetical protein | EKN05_RS26145 | Not Available | Negative | 11957 - 12088 | 5153.07 |
| is91 family transposase | EKN05_RS23530 | Not Available | Positive | 12170 - 12363 | 7404.12 |
| is91 family transposase | EKN05_RS23535 | Not Available | Positive | 12506 - 12727 | 8602.47 |
| is91 family transposase | EKN05_RS23540 | Not Available | Negative | 12748 - 12810 | 2442.01 |
| type 3 secretion system effector ospc1 | EKN05_RS23545 | Not Available | Positive | 13260 - 14672 | 53977.3 |
| is91 family transposase | EKN05_RS23550 | Not Available | Negative | 14776 - 14925 | 5615.74 |
| type iii secretion system effector ospd3 | EKN05_RS23555 | Not Available | Positive | 15001 - 16698 | 63113.0 |
| is91 family transposase | EKN05_RS23565 | Not Available | Positive | 16815 - 16934 | 4686.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





