Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | 5a M90T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1126769 bp
Thymine Count
1129426 bp
Guanine Count
1172825 bp
Cytosine Count
1167694 bp
Genome Length
4596714 bp
Protein-coding Genes
4189 genes
Non-Coding Genes
487 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family general envelope maintenance protein yqja | EKN05_RS23365 | Not Available | Negative | 4578073 - 4578735 | 24587.0 |
| protein yqim | EKN05_RS25960 | Not Available | Negative | 4578757 - 4578840 | 3305.08 |
| transcriptional regulator exur | EKN05_RS23370 | Not Available | Negative | 4579080 - 4579856 | 29837.3 |
| is1 family transposase | EKN05_RS23375 | Not Available | Negative | 4579964 - 4580661 | 26640.4 |
| tcfc e-set like domain-containing protein | EKN05_RS23380 | Not Available | Positive | 4580746 - 4583430 | 98430.9 |
| cfae/cbld family pilus tip adhesin | EKN05_RS23385 | Not Available | Positive | 4583427 - 4584515 | 40473.1 |
| hexuronate transporter exut | EKN05_RS23390 | Not Available | Negative | 4584603 - 4585901 | 46895.0 |
| glucuronate isomerase | EKN05_RS23395 | Not Available | Positive | 4586385 - 4587797 | 53990.1 |
| altronate dehydratase | EKN05_RS23400 | Not Available | Positive | 4587812 - 4589299 | 54067.1 |
| ygjv family protein | EKN05_RS23405 | Not Available | Positive | 4589382 - 4589933 | 20590.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





