Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | 5a M90T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1126769 bp
Thymine Count
1129426 bp
Guanine Count
1172825 bp
Cytosine Count
1167694 bp
Genome Length
4596714 bp
Protein-coding Genes
4189 genes
Non-Coding Genes
487 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tdca | EKN05_RS23265 | Not Available | Positive | 4559915 - 4560853 | 34540.9 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | EKN05_RS23270 | Not Available | Positive | 4560952 - 4561941 | 35162.5 |
| threonine/serine transporter tdcc | EKN05_RS23275 | Not Available | Positive | 4561963 - 4563294 | 48895.8 |
| propionate kinase | EKN05_RS23280 | Not Available | Positive | 4563320 - 4564528 | 43425.7 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EKN05_RS23285 | Not Available | Positive | 4564562 - 4566856 | 85886.2 |
| enamine/imine deaminase | EKN05_RS23290 | Not Available | Positive | 4566870 - 4567259 | 14008.0 |
| l-serine ammonia-lyase | EKN05_RS23295 | Not Available | Positive | 4567331 - 4568695 | 48466.5 |
| amino acid permease | EKN05_RS23300 | Not Available | Positive | 4568970 - 4570301 | 48381.6 |
| cysteine desulfidase | EKN05_RS23305 | Not Available | Positive | 4570329 - 4571639 | 45382.9 |
| protein yhal | EKN05_RS23310 | Not Available | Negative | 4571851 - 4572015 | 5937.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





