Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | 5a M90T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1126769 bp
Thymine Count
1129426 bp
Guanine Count
1172825 bp
Cytosine Count
1167694 bp
Genome Length
4596714 bp
Protein-coding Genes
4189 genes
Non-Coding Genes
487 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | EKN05_RS22515 | Not Available | Negative | 4413487 - 4414434 | 34185.4 |
| peptide deformylase | EKN05_RS22520 | Not Available | Negative | 4414449 - 4414958 | 19343.6 |
| dna-protecting protein dpra | EKN05_RS22525 | Not Available | Positive | 4415106 - 4416230 | 40995.3 |
| duf494 family protein smg | EKN05_RS22530 | Not Available | Positive | 4416202 - 4416675 | 18511.2 |
| type i dna topoisomerase | EKN05_RS22535 | Not Available | Positive | 4416704 - 4417246 | 19874.0 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | EKN05_RS22540 | Not Available | Positive | 4417251 - 4417823 | 20557.7 |
| shikimate dehydrogenase | EKN05_RS22545 | Not Available | Positive | 4417828 - 4418646 | 29467.4 |
| duf1488 domain-containing protein | EKN05_RS22550 | Not Available | Positive | 4418643 - 4418900 | 10007.5 |
| gamma carbonic anhydrase family protein | EKN05_RS22555 | Not Available | Negative | 4418876 - 4419430 | 20246.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4419901 - 4421442 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





