Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | 5a M90T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1126769 bp
Thymine Count
1129426 bp
Guanine Count
1172825 bp
Cytosine Count
1167694 bp
Genome Length
4596714 bp
Protein-coding Genes
4189 genes
Non-Coding Genes
487 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ysae | EKN05_RS25930 | Not Available | Positive | 4193375 - 4193446 | 2633.38 |
| type i toxin-antitoxin system toxin hoka | EKN05_RS21365 | Not Available | Negative | 4193423 - 4193575 | 6058.64 |
| is3-like element is150 family transposase | EKN05_RS21370 | Not Available | Negative | 4193677 - 4195019 | 52001.8 |
| is1 family transposase | EKN05_RS21375 | Not Available | Positive | 4195074 - 4195771 | 26621.4 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | EKN05_RS21380 | Not Available | Negative | 4195927 - 4196781 | 30377.8 |
| hypothetical protein | EKN05_RS21385 | Not Available | Positive | 4196889 - 4197167 | 9789.75 |
| acid resistance transcriptional activator gade | EKN05_RS21390 | Not Available | Negative | 4197168 - 4197695 | 20600.6 |
| acid-resistance protein hded | EKN05_RS21395 | Not Available | Negative | 4198494 - 4199066 | 20904.6 |
| acid-activated periplasmic chaperone hdea | EKN05_RS21400 | Not Available | Positive | 4199321 - 4199653 | 11858.2 |
| acid-activated periplasmic chaperone hdeb | EKN05_RS21405 | Not Available | Positive | 4199769 - 4200095 | 12073.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





