Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | 5a M90T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1126769 bp
Thymine Count
1129426 bp
Guanine Count
1172825 bp
Cytosine Count
1167694 bp
Genome Length
4596714 bp
Protein-coding Genes
4189 genes
Non-Coding Genes
487 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein ypdk | EKN05_RS03635 | Not Available | Negative | 717557 - 717628 | 2704.57 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | EKN05_RS03640 | Not Available | Negative | 717983 - 718903 | 35495.5 |
| yfdy family protein | EKN05_RS03645 | Not Available | Positive | 719256 - 719498 | 8923.5 |
| colanic acid biosynthesis lipoprotein ypdi | EKN05_RS03650 | Not Available | Negative | 719575 - 719850 | 10238.6 |
| yfdx family protein | EKN05_RS03655 | Not Available | Positive | 720147 - 720770 | 22552.0 |
| formyl-coa transferase | EKN05_RS03660 | Not Available | Positive | 721283 - 722533 | 45830.7 |
| oxalyl-coa decarboxylase | EKN05_RS03665 | Not Available | Positive | 722587 - 724281 | 60566.8 |
| transporter yfdv | EKN05_RS03670 | Not Available | Positive | 724351 - 725295 | 33617.9 |
| coa:oxalate coa-transferase | EKN05_RS03675 | Not Available | Positive | 725369 - 726514 | 41763.3 |
| acid-sensing system histidine kinase evgs | EKN05_RS03680 | Not Available | Negative | 726570 - 730163 | 134709.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





