Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | 5a M90T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1126769 bp
Thymine Count
1129426 bp
Guanine Count
1172825 bp
Cytosine Count
1167694 bp
Genome Length
4596714 bp
Protein-coding Genes
4189 genes
Non-Coding Genes
487 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamc | EKN05_RS03185 | Not Available | Positive | 628606 - 629640 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EKN05_RS03190 | Not Available | Positive | 629853 - 630566 | 26996.5 |
| neutral zinc metallopeptidase | EKN05_RS03195 | Not Available | Positive | 630734 - 631597 | 31462.0 |
| trna cytosine(34) acetyltransferase tmca | EKN05_RS03200 | Not Available | Positive | 631612 - 633627 | 74812.6 |
| esterase | EKN05_RS03205 | Not Available | Positive | 633701 - 634399 | 24800.4 |
| ypfn family protein | EKN05_RS03210 | Not Available | Negative | 634509 - 634709 | 8071.78 |
| succinyl-diaminopimelate desuccinylase | EKN05_RS03215 | Not Available | Negative | 634737 - 635864 | 41319.5 |
| arsc family reductase | EKN05_RS03220 | Not Available | Negative | 635868 - 636224 | 13515.2 |
| protein ypfm | EKN05_RS03225 | Not Available | Positive | 636605 - 636664 | 2408.02 |
| multidrug efflux rnd transporter permease acrd | EKN05_RS03235 | Not Available | Negative | 636763 - 639876 | 113170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





