Hydrogenophaga pseudoflava strain DSM 1084

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga pseudoflava strain DSM 1084 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This organism is notable for possessing two replicons, which are indicated by its accession numbers NZ_CP037867.1 and NZ_CP037868.1. As an aerobic bacterium, Hydrogenophaga pseudoflava requires oxygen for its metabolic processes, positioning it within environments rich in this element. Its unique traits make it a subject of interest within the wider context of microbial ecology, particularly in environments where aerobic degradation of organic compounds occurs. The presence of two replicons in its genetic structure may suggest a complex regulatory mechanism for gene expression and adaptation to various environmental conditions, contributing to its ecological versatility. Understanding the genetic framework of Hydrogenophaga pseudoflava can provide insights into its metabolic capabilities and its role in biogeochemical cycles, especially those involving hydrogen and other small molecules in its natural habitats. Overall, Hydrogenophaga pseudoflava strain DSM 1084 exemplifies the diversity of aerobic, Gram-negative bacteria and their potential contributions to ecological processes and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga pseudoflava
Strainstrain DSM 1084

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga pseudoflava strain DSM 1084 chromosome, complete

Gene Summary

Adenine Count

798952 bp

Thymine Count

799570 bp

Guanine Count

1627581 bp

Cytosine Count

1634682 bp

Genome Length

4860785 bp

Protein-coding Genes

4630 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHPF_RS23330Not AvailablePositive945 - 157122634.1
nyn domain-containing proteinHPF_RS23335Not AvailableNegative1611 - 234227376.7
hypothetical proteinHPF_RS23340Not AvailablePositive2599 - 292812467.1
duf932 domain-containing proteinHPF_RS23345Not AvailablePositive3976 - 480931408.3
hypothetical proteinHPF_RS23350Not AvailablePositive4881 - 517710057.6
antitoxinHPF_RS23355Not AvailablePositive5186 - 551511816.1
zeta toxin family proteinHPF_RS23360Not AvailablePositive5518 - 669642176.7
hypothetical proteinHPF_RS23365Not AvailablePositive6777 - 710912022.2
cupin domain-containing proteinHPF_RS23375Not AvailableNegative7614 - 797012552.8
chlorite dismutase family proteinHPF_RS23380Not AvailableNegative8104 - 866421615.7

Displaying genes 1 – 10 of 4741 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.