Citrobacter arsenatis strain LY-1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter arsenatis strain LY-1 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is notable for having two replicons, indicating a complex genetic structure that may contribute to its adaptability and resilience in various environments. The strain is cataloged under the accession numbers NZ_CP037862.1 and NZ_CP037863.1, which are crucial for researchers seeking to access its genomic data for further study. The classification of Citrobacter arsenatis as a member of the genus Citrobacter suggests that it may play a role in specific ecological niches, particularly in environments influenced by arsenic, given its species name. The presence of flagella may enhance its ability to colonize diverse habitats, potentially including contaminated sites. This motility could enable the bacterium to explore and exploit various ecological resources, contributing to its survival and proliferation. In summary, Citrobacter arsenatis strain LY-1 exhibits key traits such as Gram-negative characteristics, rod shape, and flagella presence, along with a dual-replicon structure. These features may provide insights into the bacterium's ecological roles, particularly in environments with high arsenic levels, highlighting its potential significance in bioremediation or ecological balance within such contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter arsenatis
Strainstrain LY-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter arsenatis strain LY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter arsenatis strain LY-1 plasmid unnamed1, complete

Gene Summary

Adenine Count

3801 bp

Thymine Count

4278 bp

Guanine Count

4118 bp

Cytosine Count

3658 bp

Genome Length

15855 bp

Protein-coding Genes

22 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cu(+)/ag(+) efflux rnd transporter outer membrane channel silcE1B03_RS00495Not AvailablePositive64879 - 6626451181.5
cation efflux system protein cusfE1B03_RS00500Not AvailablePositive66294 - 6664712622.1
cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit silbE1B03_RS00505Not AvailablePositive66761 - 6805347709.4
cu(+)/ag(+) efflux rnd transporter permease subunit silaE1B03_RS00510Not AvailablePositive68064 - 71210114619.0
duf411 domain-containing proteinE1B03_RS00515Not AvailablePositive71297 - 7173715492.1
ag(+)-translocating p-type atpase silpE1B03_RS00520Not AvailablePositive71835 - 7430687942.1
duf2933 domain-containing proteinE1B03_RS00525Not AvailablePositive74347 - 745447261.74
peptidoglycan dd-metalloendopeptidase family proteinE1B03_RS00530Not AvailableNegative74578 - 7531527025.2
is66 family transposaseE1B03_RS00535Not AvailableNegative75634 - 7717257951.1
is66 family insertion sequence element accessory protein tnpbE1B03_RS00540Not AvailableNegative77221 - 7756812797.9

Displaying genes 101 – 110 of 188 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.