Citrobacter sp. ABFQG

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. ABFQG is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism possesses three replicons, indicating a complex plasmid structure that may contribute to its genetic diversity and adaptability. The genetic information for Citrobacter sp. ABFQG is accessible through several sequence accessions: NZ_CP036435.1, NZ_CP036436.1, and NZ_CP036437.1. The genus Citrobacter is known for its versatility in various environments, including soil and gastrointestinal tracts of animals and humans. The flagellar motility of Citrobacter sp. ABFQG may enhance its ability to colonize diverse habitats and respond to environmental changes. The presence of multiple replicons could also facilitate horizontal gene transfer, potentially allowing the acquisition of beneficial traits such as antibiotic resistance or metabolic capabilities. Understanding the ecological role of Citrobacter sp. ABFQG can provide insights into microbial interactions within its environment and its potential implications in health, as some Citrobacter species are associated with opportunistic infections. The genetic characteristics highlighted by the accessions may also be useful in studying the evolutionary relationships within the Citrobacter genus and assessing the impact of environmental factors on its adaptability and survival.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. ABFQG
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. ABFQG
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. ABFQG plasmid pKPC-e4b7, complete sequence.

Gene Summary

Adenine Count

13686 bp

Thymine Count

13105 bp

Guanine Count

12301 bp

Cytosine Count

12478 bp

Genome Length

51570 bp

Protein-coding Genes

40 genes

Non-Coding Genes

22 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trbg/virb9 family p-type conjugative transfer proteinWN16_RS24325Not AvailableNegative49499 - 5033230061.9
virb8/trbf family proteinWN16_RS24330Not AvailableNegative50337 - 5106227094.1
exc2 family lipoproteinWN16_RS23940Not AvailablePositive904 - 132315660.5
hypothetical proteinWN16_RS23945Not AvailablePositive1629 - 18929892.61
type ii toxin-antitoxin system rele/pare family toxinWN16_RS23950Not AvailablePositive1882 - 218111410.4
hypothetical proteinWN16_RS23955Not AvailableNegative2243 - 262014374.0
rop family plasmid primer rna-binding proteinWN16_RS23960Not AvailablePositive2689 - 28686939.39
hypothetical proteinWN16_RS23965Not AvailableNegative2896 - 342620562.6
mobc family replication-relaxation proteinWN16_RS23970Not AvailableNegative3433 - 416427676.5
type iv secretory system conjugative dna transfer family proteinWN16_RS23975Not AvailableNegative4164 - 575958486.1

Displaying genes 61 – 70 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.