Citrobacter sp. ABFQG

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. ABFQG is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism possesses three replicons, indicating a complex plasmid structure that may contribute to its genetic diversity and adaptability. The genetic information for Citrobacter sp. ABFQG is accessible through several sequence accessions: NZ_CP036435.1, NZ_CP036436.1, and NZ_CP036437.1. The genus Citrobacter is known for its versatility in various environments, including soil and gastrointestinal tracts of animals and humans. The flagellar motility of Citrobacter sp. ABFQG may enhance its ability to colonize diverse habitats and respond to environmental changes. The presence of multiple replicons could also facilitate horizontal gene transfer, potentially allowing the acquisition of beneficial traits such as antibiotic resistance or metabolic capabilities. Understanding the ecological role of Citrobacter sp. ABFQG can provide insights into microbial interactions within its environment and its potential implications in health, as some Citrobacter species are associated with opportunistic infections. The genetic characteristics highlighted by the accessions may also be useful in studying the evolutionary relationships within the Citrobacter genus and assessing the impact of environmental factors on its adaptability and survival.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. ABFQG
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. ABFQG
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. ABFQG plasmid pKPC-e4b7, complete sequence.

Gene Summary

Adenine Count

13686 bp

Thymine Count

13105 bp

Guanine Count

12301 bp

Cytosine Count

12478 bp

Genome Length

51570 bp

Protein-coding Genes

40 genes

Non-Coding Genes

22 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseWN16_RS01245Not AvailableNegative246045 - 24686629298.1
l-threonylcarbamoyladenylate synthase type 1 tsacWN16_RS01250Not AvailableNegative246868 - 24744020583.6
type i dna topoisomeraseWN16_RS01255Not AvailableNegative247445 - 24798719963.2
duf494 family protein smgWN16_RS01260Not AvailableNegative248014 - 24848718453.1
dna-protecting protein dpraWN16_RS01265Not AvailableNegative248459 - 24958341244.6
peptide deformylaseWN16_RS01270Not AvailablePositive249713 - 25022219286.4
methionyl-trna formyltransferaseWN16_RS01275Not AvailablePositive250237 - 25118434092.4
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbWN16_RS01280Not AvailablePositive251236 - 25252548344.5
trk system potassium transporter trkaWN16_RS01285Not AvailablePositive252547 - 25392350338.7
large-conductance mechanosensitive channel protein msclWN16_RS01290Not AvailablePositive254065 - 25447815040.8

Displaying genes 441 – 450 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.