Flammeovirga pectinis strain L12M1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pectinis strain L12M1 is a Gram-negative, rod-shaped bacterium characterized by its possession of two replicons. This strain is cataloged under the GenBank accessions NZ_CP034563.1 and NZ_CP034564.1, which provide genomic information relevant to its classification and biological functions. The Gram-negative classification indicates that Flammeovirga pectinis L12M1 has a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium may play a role in its motility and ability to colonize specific niches. The presence of two replicons suggests a complex genomic architecture that may support a range of metabolic capabilities and adaptability to varying environmental conditions. This trait is often associated with bacteria that can thrive in diverse habitats, potentially contributing to their ecological versatility. In summary, Flammeovirga pectinis strain L12M1 represents a rod-shaped, Gram-negative bacterium with a dual-replicon system. Its structural characteristics and genomic configuration may provide insights into its ecological roles, particularly in environments where adaptability and metabolic diversity are essential for survival. Understanding such traits can enhance our knowledge of microbial ecology and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pectinis
Strainstrain L12M1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pectinis strain L12M1 chromosome 2, complete

Gene Summary

Adenine Count

479869 bp

Thymine Count

483069 bp

Guanine Count

225332 bp

Cytosine Count

223085 bp

Genome Length

1411355 bp

Protein-coding Genes

995 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc-dependent alcohol dehydrogenaseEI427_RS25410Not AvailableNegative1363321 - 136434337188.5
sugar-binding domain-containing proteinEI427_RS25415Not AvailableNegative1364357 - 136694598561.2
hypothetical proteinEI427_RS25420Not AvailableNegative1367076 - 136866858429.8
ragb/susd family nutrient uptake outer membrane proteinEI427_RS25425Not AvailableNegative1368700 - 137041864550.5
susc/raga family tonb-linked outer membrane proteinEI427_RS25430Not AvailableNegative1370440 - 1373529113606.0
tetratricopeptide repeat proteinEI427_RS25435Not AvailablePositive1373812 - 137548865707.7
carbohydrate-binding proteinEI427_RS25440Not AvailableNegative1375618 - 137815292617.9
hypothetical proteinEI427_RS25445Not AvailableNegative1378175 - 13783547023.51
iron-sulfur cluster biosynthesis family proteinEI427_RS25450Not AvailableNegative1379072 - 137981828407.3
hypothetical proteinEI427_RS25455Not AvailableNegative1380069 - 138072824524.2

Displaying genes 981 – 990 of 1059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.