Flammeovirga pectinis strain L12M1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pectinis strain L12M1 is a Gram-negative, rod-shaped bacterium characterized by its possession of two replicons. This strain is cataloged under the GenBank accessions NZ_CP034563.1 and NZ_CP034564.1, which provide genomic information relevant to its classification and biological functions. The Gram-negative classification indicates that Flammeovirga pectinis L12M1 has a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium may play a role in its motility and ability to colonize specific niches. The presence of two replicons suggests a complex genomic architecture that may support a range of metabolic capabilities and adaptability to varying environmental conditions. This trait is often associated with bacteria that can thrive in diverse habitats, potentially contributing to their ecological versatility. In summary, Flammeovirga pectinis strain L12M1 represents a rod-shaped, Gram-negative bacterium with a dual-replicon system. Its structural characteristics and genomic configuration may provide insights into its ecological roles, particularly in environments where adaptability and metabolic diversity are essential for survival. Understanding such traits can enhance our knowledge of microbial ecology and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pectinis
Strainstrain L12M1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pectinis strain L12M1 plasmid unnamed1, complete

Gene Summary

Adenine Count

21913 bp

Thymine Count

21112 bp

Guanine Count

9078 bp

Cytosine Count

8874 bp

Genome Length

60977 bp

Protein-coding Genes

56 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dnaj domain-containing proteinEI427_RS20605Not AvailableNegative362 - 125234018.0
ompa family proteinEI427_RS20610Not AvailableNegative1267 - 315072030.4
type ix secretion system membrane protein porp/sprfEI427_RS20615Not AvailablePositive3386 - 430934514.4
endonuclease/exonuclease/phosphatase family proteinEI427_RS20620Not AvailablePositive4538 - 557839507.1
tonb-dependent receptorEI427_RS20625Not AvailablePositive5608 - 8328102178.0
duf6359 domain-containing proteinEI427_RS20630Not AvailablePositive8375 - 11506112810.0
duf5689 domain-containing proteinEI427_RS20635Not AvailablePositive11575 - 1369277944.1
m43 family zinc metalloproteaseEI427_RS20640Not AvailableNegative13774 - 1470935819.9
tylf/mycf/novp-related o-methyltransferaseEI427_RS20645Not AvailableNegative14900 - 1572131934.8
tolc family proteinEI427_RS20650Not AvailableNegative15726 - 1714154283.9

Displaying genes 1 – 10 of 1059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.