Flammeovirga pectinis strain L12M1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pectinis strain L12M1 is a Gram-negative, rod-shaped bacterium characterized by its possession of two replicons. This strain is cataloged under the GenBank accessions NZ_CP034563.1 and NZ_CP034564.1, which provide genomic information relevant to its classification and biological functions. The Gram-negative classification indicates that Flammeovirga pectinis L12M1 has a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium may play a role in its motility and ability to colonize specific niches. The presence of two replicons suggests a complex genomic architecture that may support a range of metabolic capabilities and adaptability to varying environmental conditions. This trait is often associated with bacteria that can thrive in diverse habitats, potentially contributing to their ecological versatility. In summary, Flammeovirga pectinis strain L12M1 represents a rod-shaped, Gram-negative bacterium with a dual-replicon system. Its structural characteristics and genomic configuration may provide insights into its ecological roles, particularly in environments where adaptability and metabolic diversity are essential for survival. Understanding such traits can enhance our knowledge of microbial ecology and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pectinis
Strainstrain L12M1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pectinis strain L12M1 chromosome 2, complete

Gene Summary

Adenine Count

479869 bp

Thymine Count

483069 bp

Guanine Count

225332 bp

Cytosine Count

223085 bp

Genome Length

1411355 bp

Protein-coding Genes

995 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEI427_RS26030Not AvailableNegative1184417 - 11845755983.24
tonb-dependent receptor domain-containing proteinEI427_RS24670Not AvailableNegative1184919 - 118753797907.8
pepsy-associated tm helix domain-containing proteinEI427_RS24675Not AvailableNegative1187881 - 118902943912.7
duf4374 domain-containing proteinEI427_RS24680Not AvailableNegative1189099 - 119033444712.4
tonb-dependent receptorEI427_RS24685Not AvailableNegative1190353 - 119268688645.5
helix-turn-helix domain-containing proteinEI427_RS24690Not AvailableNegative1192698 - 119366337513.3
pyridoxal phosphate-dependent decarboxylase family proteinEI427_RS24695Not AvailablePositive1193984 - 119551957211.5
lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family proteinEI427_RS24700Not AvailablePositive1195533 - 119684950683.5
mfs transporterEI427_RS24705Not AvailablePositive1196851 - 119803545376.4
gnat family n-acetyltransferaseEI427_RS24710Not AvailablePositive1198032 - 119865824446.9

Displaying genes 831 – 840 of 1059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.