Flammeovirga pectinis strain L12M1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pectinis strain L12M1 is a Gram-negative, rod-shaped bacterium characterized by its possession of two replicons. This strain is cataloged under the GenBank accessions NZ_CP034563.1 and NZ_CP034564.1, which provide genomic information relevant to its classification and biological functions. The Gram-negative classification indicates that Flammeovirga pectinis L12M1 has a thin peptidoglycan layer surrounded by an outer membrane, a feature that can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium may play a role in its motility and ability to colonize specific niches. The presence of two replicons suggests a complex genomic architecture that may support a range of metabolic capabilities and adaptability to varying environmental conditions. This trait is often associated with bacteria that can thrive in diverse habitats, potentially contributing to their ecological versatility. In summary, Flammeovirga pectinis strain L12M1 represents a rod-shaped, Gram-negative bacterium with a dual-replicon system. Its structural characteristics and genomic configuration may provide insights into its ecological roles, particularly in environments where adaptability and metabolic diversity are essential for survival. Understanding such traits can enhance our knowledge of microbial ecology and the functional roles of bacteria in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pectinis
Strainstrain L12M1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pectinis strain L12M1 chromosome 2, complete

Gene Summary

Adenine Count

479869 bp

Thymine Count

483069 bp

Guanine Count

225332 bp

Cytosine Count

223085 bp

Genome Length

1411355 bp

Protein-coding Genes

995 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinEI427_RS21500Not AvailableNegative248872 - 25054863326.6
susc/raga family tonb-linked outer membrane proteinEI427_RS21505Not AvailableNegative250652 - 253795115817.0
hypothetical proteinEI427_RS21510Not AvailableNegative254020 - 25597872200.4
hybrid sensor histidine kinase/response regulator transcription factorEI427_RS21515Not AvailableNegative257002 - 261057156866.0
sugar-binding domain-containing proteinEI427_RS21520Not AvailableNegative261065 - 26350992772.3
haeplyid family proteinEI427_RS21525Not AvailableNegative264100 - 26496333382.1
efflux rnd transporter permease subunitEI427_RS21530Not AvailableNegative265698 - 268790114688.0
efflux rnd transporter periplasmic adaptor subunitEI427_RS21535Not AvailableNegative268797 - 26990340481.0
tolc family proteinEI427_RS21540Not AvailableNegative269975 - 27238390735.8
hypothetical proteinEI427_RS21545Not AvailableNegative272578 - 27313221068.4

Displaying genes 181 – 190 of 1059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.