Pseudomonas syringae strain Ps25

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae strain Ps25 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as a heterotroph, utilizing organic compounds as its energy source. This strain is characterized by its aerobic metabolism, necessitating the presence of oxygen for growth and survival. Pseudomonas syringae strains, including Ps25, are known to inhabit a variety of environments, indicating their versatility and adaptability to different ecological niches. The ability of Pseudomonas syringae strain Ps25 to thrive in multiple habitats suggests that it may play a role in various ecological interactions, including nutrient cycling and plant-microbe relationships. Its aerobic nature implies that it may be associated with environments where oxygen is readily available, such as soil or water systems, which could facilitate its interaction with other microbial communities and affect local biodiversity. Understanding the ecological functions of strains like Ps25 could provide insights into their contributions to ecosystem dynamics and their potential applications in biotechnology and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainstrain Ps25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae strain Ps25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae strain Ps25


Gene Summary

Adenine Count

28619 bp

Thymine Count

28832 bp

Guanine Count

34996 bp

Cytosine Count

35889 bp

Genome Length

128340 bp

Protein-coding Genes

135 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEIZ61_RS33140Not AvailablePositive1 - 2338357.25
duf932 domain-containing proteinEIZ61_RS31545Not AvailableNegative341 - 117731590.4
type ii toxin-antitoxin system rele/pare family toxinEIZ61_RS31550Not AvailableNegative1223 - 14056792.85
mobilization proteinEIZ61_RS31555Not AvailablePositive1501 - 177910092.1
hypothetical proteinEIZ61_RS31560Not AvailableNegative1853 - 20537411.63
type ii toxin-antitoxin system rele/pare family toxinEIZ61_RS31565Not AvailableNegative2122 - 283226795.8
is21-like element ispsy4 family transposaseEIZ61_RS31570Not AvailablePositive2921 - 394338349.4
is21-like element ispsy4 family helper atpase istbEIZ61_RS31575Not AvailablePositive3940 - 474929733.8
type ii toxin-antitoxin system rele/pare family toxinEIZ61_RS33145Not AvailableNegative5068 - 538211185.7
recombinase family proteinEIZ61_RS31585Not AvailablePositive5605 - 622523157.9

Displaying genes 1 – 10 of 6068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ChlorosisCausesPMC3202874
NecrosisCausesPMC3202874
Foliar necroses and cankersCausesPMC6638699
Bacterial cankerCausesPMC8815115
BlightCausesPMC12030312
Plant diseasesCausesPMC3029378
Bacterial cankerCausesPMC4803819

Displaying health effects 1 – 7 of 7 in total