Escherichia coli strain CRE10

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CRE10 is a Gram-negative, rod-shaped bacterium that typically presents in pairs or as single cells. This strain exhibits a facultative anaerobic metabolism, allowing it to thrive in environments with or without oxygen. Optimal growth occurs at 37.0°C, which is consistent with the typical human body temperature, indicating a close association with host organisms. As a member of the Enterobacteriaceae family, E. coli strain CRE10 is primarily found in host-associated habitats, suggesting an adaptation to living in the gastrointestinal tract of warm-blooded animals. The ability to exist in both aerobic and anaerobic conditions may provide this strain with a competitive advantage in fluctuating microenvironments within the host, where oxygen levels can vary significantly. The unique combination of traits observed in E. coli strain CRE10 positions it as an important organism for further investigation, particularly in understanding the dynamics of microbial communities in the gut and their interactions with the host immune system. Given its association with host environments, studying this strain may reveal insights into the roles of specific E. coli strains in health and disease, as well as their potential impacts on nutrient absorption and gut microbiota composition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain CRE10

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain CRE10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Gene Summary

Adenine Count

16836 bp

Thymine Count

18666 bp

Guanine Count

13442 bp

Cytosine Count

12740 bp

Genome Length

61684 bp

Protein-coding Genes

77 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinEJC75_RS25710Not Available+244 - 52210664.7
duf5431 family proteinEJC75_RS25715Not Available+942 - 11849306.07
hypothetical proteinEJC75_RS26920Not Available-1305 - 176017132.9
type ii toxin-antitoxin system hica family toxinEJC75_RS25725Not Available+2057 - 22396648.32
type ii toxin-antitoxin system hicb family antitoxinEJC75_RS25730Not Available+2264 - 270116115.9
hypothetical proteinEJC75_RS25735Not Available-2832 - 315812190.5
hypothetical proteinEJC75_RS25740Not Available-3178 - 388526847.0
conjugal transfer protein tralEJC75_RS25745Not Available-3887 - 463928123.7
hypothetical proteinEJC75_RS25750Not Available-4657 - 505815430.3
plasmid mobilization proteinEJC75_RS25755Not Available+5426 - 576713148.0

Displaying genes 1 – 10 of 5176 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

136 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 136 metabolites