Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain HP42K |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain HP42K plasmid pHP42-2, complete
Gene Summary
Adenine Count
945 bp
Thymine Count
737 bp
Guanine Count
467 bp
Cytosine Count
509 bp
Genome Length
2658 bp
Protein-coding Genes
1 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cag pathogenicity island protein b | D8X56_RS02900 | Not Available | Negative | 589272 - 589499 | 9017.09 |
| type iv secretion system oncogenic effector caga | D8X56_RS02905 | Not Available | Positive | 589923 - 593465 | 131326.0 |
| duf3944 domain-containing protein | D8X56_RS02910 | Not Available | Negative | 593528 - 593799 | 9580.81 |
| glutamate racemase | D8X56_RS02915 | Not Available | Negative | 593951 - 594718 | 28451.9 |
| transcription termination factor rho | D8X56_RS02920 | Not Available | Negative | 594756 - 596072 | 49547.6 |
| 50s ribosomal protein l31 | D8X56_RS02925 | Not Available | Positive | 596336 - 596539 | 7682.35 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | D8X56_RS02930 | Not Available | Positive | 596564 - 597427 | 32663.8 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | D8X56_RS02935 | Not Available | Positive | 597440 - 598123 | 24869.9 |
| sialidase | D8X56_RS02940 | Not Available | Positive | 598136 - 599101 | 37028.3 |
| hypothetical protein | D8X56_RS02945 | Not Available | Positive | 599098 - 599919 | 31375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |






