Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain HP42K |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain HP42K chromosome, complete genome.
Gene Summary
Adenine Count
500927 bp
Thymine Count
505143 bp
Guanine Count
318846 bp
Cytosine Count
320867 bp
Genome Length
1645783 bp
Protein-coding Genes
1528 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein | D8X56_RS00005 | Not Available | Positive | 1 - 1263 | 49503.1 |
| transcription antitermination factor nusb | D8X56_RS00080 | Not Available | Negative | 1 - 417 | 15491.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | D8X56_RS00085 | Not Available | Negative | 419 - 889 | 16953.7 |
| 3-deoxy-8-phosphooctulonate synthase | D8X56_RS00090 | Not Available | Negative | 899 - 1729 | 30295.5 |
| carbonic anhydrase | D8X56_RS00095 | Not Available | Negative | 1716 - 2381 | 25796.9 |
| orotidine-5'-phosphate decarboxylase | D8X56_RS00100 | Not Available | Positive | 2503 - 3186 | 25346.1 |
| pantoate--beta-alanine ligase | D8X56_RS00105 | Not Available | Positive | 3187 - 4017 | 31107.9 |
| Trna-glu | Not Available | Not Available | Positive | 4031 - 4106 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4170 - 4246 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 4287 - 4362 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |






