Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain HP42K |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori strain HP42K plasmid pHP42-2, complete
Gene Summary
Adenine Count
945 bp
Thymine Count
737 bp
Guanine Count
467 bp
Cytosine Count
509 bp
Genome Length
2658 bp
Protein-coding Genes
1 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgg | D8X56_RS08010 | Not Available | Positive | 1642394 - 1643182 | 28063.0 |
| duf3944 domain-containing protein | D8X56_RS08105 | Not Available | Negative | 1643205 - 1644140 | 34170.7 |
| hypothetical protein | D8X56_RS08110 | Not Available | Negative | 1644511 - 1644651 | 5213.7 |
| duf3944 domain-containing protein | D8X56_RS08025 | Not Available | Negative | 1644735 - 1645496 | 28450.2 |
| replication/maintenance protein repl | D8X56_RS00020 | Not Available | Negative | 1402 - 1887 | 18103.0 |
| type ii toxin-antitoxin system hicb family antitoxin | D8X56_RS00025 | Not Available | Positive | 2155 - 2373 | 8027.7 |
| type ii toxin-antitoxin system hica family toxin | D8X56_RS00030 | Not Available | Positive | 2366 - 2560 | 7494.4 |
| is607 family transposase | D8X56_RS00035 | Not Available | Positive | 2557 - 3189 | 24115.4 |
| rna-guided endonuclease insq/tnpb family protein | D8X56_RS00040 | Not Available | Positive | 3176 - 4405 | 46739.5 |
| hypothetical protein | D8X56_RS08305 | Not Available | Positive | 4514 - 4648 | 5112.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |






