Helicobacter pylori strain HP42K

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain HP42K is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which aligns with its adaptation to a host-associated habitat, typically found in the gastric mucosa of mammals. The microaerophilic nature of H. pylori strain HP42K indicates that it requires reduced oxygen levels for growth, which is consistent with its ecological niche within the host stomach, where oxygen concentrations are lower than in the atmosphere. This bacterium's unique morphology, combined with its specific habitat and growth requirements, highlights its specialized adaptations for survival in a challenging environment. The strain's association with the gastric environment suggests potential roles in influencing local microbial communities, possibly affecting host health and disease states. Understanding the ecological dynamics of H. pylori strain HP42K may provide insights into its interactions with both the host and other microbial inhabitants of the gastric ecosystem, revealing the intricate balance maintained within this specialized habitat.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain HP42K

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain HP42K
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain HP42K


Gene Summary

Adenine Count

945 bp

Thymine Count

737 bp

Guanine Count

467 bp

Cytosine Count

509 bp

Genome Length

2658 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
replication initiation proteinD8X56_RS00005Not Available+1 - 126349503.1
transcription antitermination factor nusbD8X56_RS00080Not Available-1 - 41715491.9
6,7-dimethyl-8-ribityllumazine synthaseD8X56_RS00085Not Available-419 - 88916953.7
3-deoxy-8-phosphooctulonate synthaseD8X56_RS00090Not Available-899 - 172930295.5
carbonic anhydraseD8X56_RS00095Not Available-1716 - 238125796.9
orotidine-5'-phosphate decarboxylaseD8X56_RS00100Not Available+2503 - 318625346.1
pantoate--beta-alanine ligaseD8X56_RS00105Not Available+3187 - 401731107.9
Trna-gluNot AvailableNot Available+4031 - 4106Not Available
Trna-aspNot AvailableNot Available+4170 - 4246Not Available
Trna-valNot AvailableNot Available+4287 - 4362Not Available

Displaying genes 1 – 10 of 1588 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites