Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor pqqu | D9N32_RS02975 | Not Available | Negative | 220056 - 222158 | 77297.1 |
| ynce family protein | D9N32_RS02980 | Not Available | Positive | 222400 - 223461 | 38674.2 |
| l-asparagine permease | D9N32_RS02985 | Not Available | Negative | 223574 - 225073 | 54236.2 |
| glutathione s-transferase family protein | D9N32_RS02990 | Not Available | Positive | 225340 - 225957 | 23417.1 |
| ynch family protein | D9N32_RS02995 | Not Available | Positive | 226038 - 226244 | 8009.24 |
| type vi secretion system tip protein vgrg | D9N32_RS03000 | Not Available | Positive | 227054 - 229162 | 78680.8 |
| rhs element core protein | D9N32_RS03005 | Not Available | Positive | 229229 - 233434 | 157599.0 |
| hypothetical protein | D9N32_RS03010 | Not Available | Positive | 233435 - 233833 | 15090.2 |
| tail fiber assembly protein | D9N32_RS03020 | Not Available | Positive | 234139 - 234659 | 19991.1 |
| diguanylate cyclase | D9N32_RS03025 | Not Available | Negative | 234764 - 235813 | 39169.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





