Escherichia coli strain WCHEC000837

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain WCHEC000837 is a Gram-negative, facultative anaerobic bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This strain is typically found in host-associated habitats, demonstrating a free-living biotic relationship. It can thrive at an optimal temperature of 37°C and is classified as mesophilic, with a temperature range suitable for growth. WCHEC000837 has a complex genetic structure, containing four replicons and two membranes. Its wide host range includes Homo sapiens, various domesticated animals such as Gallus gallus (chickens), Bos taurus (cattle), and Sus scrofa (pigs), as well as diverse taxa including Metazoa, Mollusca, and Aves. This diversity reflects its ecological adaptability and potential for transmission across species. The strain is associated with numerous health effects, particularly in humans, where it is known to cause urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions like neonatal meningitis and hemolytic uremic syndrome (HUS). These health impacts highlight the strain's pathogenicity, particularly in human hosts, and its role in foodborne infections and disease. Given its extensive host range and pathogenic potential, WCHEC000837 serves as a significant example of how E. coli strains can influence both animal and human health. The ecological insight gleaned from this strain underscores the importance of monitoring its transmission and pathogenicity, especially in environments where it can affect both livestock and humans.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain WCHEC000837

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain WCHEC000837
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain WCHEC000837


Gene Summary

Adenine Count

22988 bp

Thymine Count

25382 bp

Guanine Count

21667 bp

Cytosine Count

22501 bp

Genome Length

92538 bp

Protein-coding Genes

17 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive900 - 913Not Available
AttlNot AvailableNot AvailablePositive2729 - 2740Not Available
IntegraseD9N32_RS01665Not AvailableNegative2884 - 367529283.8
hypothetical proteinD9N32_RS01670Not AvailableNegative3672 - 441528275.6
hypothetical proteinD9N32_RS01675Not AvailableNegative4466 - 481613419.7
hypothetical proteinD9N32_RS28365Not AvailableNegative4960 - 52058615.24
Orf 17D9N32_RS01685Not AvailableNegative5441 - 724968713.5
sir2 family proteinD9N32_RS01690Not AvailableNegative7246 - 829240195.1
Is1 transposase bD9N32_RS01695Not AvailablePositive8476 - 916824839.1
is110 family transposaseD9N32_RS01700Not AvailablePositive9184 - 93275301.67

Displaying genes 1 – 10 of 5322 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total