Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is200/is605-like element is200c family transposase | D9N32_RS02870 | Not Available | Positive | 203434 - 203892 | 18028.0 |
| bene family transporter ydco | D9N32_RS02875 | Not Available | Negative | 204000 - 205172 | 40477.7 |
| dna-binding transcriptional regulator sutr | D9N32_RS02880 | Not Available | Positive | 205264 - 205800 | 19653.2 |
| 23s rrna 5-hydroxycytidine c2501 synthase | D9N32_RS02885 | Not Available | Positive | 205873 - 207834 | 72794.1 |
| yncj family protein | D9N32_RS02890 | Not Available | Negative | 207926 - 208156 | 8741.39 |
| type ii toxin-antitoxin system mrna interferase toxin hica | D9N32_RS02895 | Not Available | Positive | 208378 - 208554 | 6801.35 |
| type ii toxin-antitoxin system antitoxin hicb | D9N32_RS02900 | Not Available | Positive | 208600 - 209016 | 15247.5 |
| plp-dependent aminotransferase family protein | D9N32_RS02905 | Not Available | Positive | 209095 - 210501 | 52743.8 |
| putative abc transporter substrate-binding protein ydcs | D9N32_RS02910 | Not Available | Positive | 210746 - 211891 | 42400.5 |
| abc transporter atp-binding protein | D9N32_RS02915 | Not Available | Positive | 211909 - 212922 | 37033.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





