Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein sapa | D9N32_RS02375 | Not Available | Negative | 92093 - 93736 | 61568.2 |
| ymja family protein | D9N32_RS02380 | Not Available | Negative | 94049 - 94294 | 9283.79 |
| putrescine/proton symporter puup | D9N32_RS02385 | Not Available | Negative | 94428 - 95813 | 50802.8 |
| protein ymje | D9N32_RS27435 | Not Available | Negative | 95803 - 95967 | 5971.24 |
| glutamate-putrescine ligase | D9N32_RS02390 | Not Available | Negative | 96116 - 97534 | 53180.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | D9N32_RS02395 | Not Available | Positive | 97746 - 98510 | 27999.7 |
| hth-type transcriptional regulator puur | D9N32_RS02400 | Not Available | Positive | 98537 - 99094 | 20092.8 |
| aldehyde dehydrogenase puuc | D9N32_RS02405 | Not Available | Positive | 99244 - 100731 | 53372.4 |
| gamma-glutamylputrescine oxidase | D9N32_RS02410 | Not Available | Positive | 100733 - 102013 | 47130.2 |
| 4-aminobutyrate transaminase | D9N32_RS02415 | Not Available | Positive | 102051 - 103316 | 44689.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





