Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inverse autotransporter invasin ycho | D9N32_RS01935 | Not Available | Positive | 3468 - 4862 | 52125.7 |
| two-component system response regulator narl | D9N32_RS01940 | Not Available | Negative | 4863 - 5513 | 23928.3 |
| nitrate/nitrite two-component system sensor histidine kinase narx | D9N32_RS01945 | Not Available | Negative | 5506 - 7302 | 67087.0 |
| nitrate transporter nark | D9N32_RS01955 | Not Available | Positive | 7641 - 9032 | 49668.2 |
| nitrate reductase subunit alpha | D9N32_RS01960 | Not Available | Positive | 9427 - 13170 | 140676.0 |
| nitrate reductase subunit beta | D9N32_RS01965 | Not Available | Positive | 13167 - 14705 | 58083.6 |
| nitrate reductase molybdenum cofactor assembly chaperone | D9N32_RS01970 | Not Available | Positive | 14702 - 15412 | 26395.2 |
| respiratory nitrate reductase subunit gamma | D9N32_RS01975 | Not Available | Positive | 15412 - 16089 | 25484.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 16274 - 16405 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 16452 - 16583 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





