Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | D9N32_RS01890 | Not Available | Negative | 41198 - 41803 | 22412.2 |
| duf4113 domain-containing protein | D9N32_RS01895 | Not Available | Positive | 41898 - 44177 | 84915.8 |
| is6-like element is26 family transposase | D9N32_RS01900 | Not Available | Positive | 44241 - 44945 | 27896.9 |
| duf4113 domain-containing protein | D9N32_RS01905 | Not Available | Positive | 44999 - 45091 | 3474.25 |
| Tail fiber assembly protein | D9N32_RS00010 | Not Available | Positive | 307 - 921 | 22257.6 |
| Tail fiber repeat family protein | D9N32_RS00015 | Not Available | Negative | 928 - 2775 | 64814.3 |
| Tail fiber protein r | D9N32_RS27720 | Not Available | Negative | 2778 - 3224 | 16375.5 |
| Putative tail tube structural protein gp16 | D9N32_RS00025 | Not Available | Negative | 3319 - 4164 | 32185.3 |
| Putative baseplate structural protein | D9N32_RS00030 | Not Available | Negative | 4175 - 5605 | 53451.2 |
| Pmga | D9N32_RS00035 | Not Available | Negative | 5602 - 5976 | 13643.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





