Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit f | D9N32_RS24015 | Not Available | Negative | 4453912 - 4454001 | 3041.92 |
| ybfa family protein | D9N32_RS24020 | Not Available | Positive | 4454313 - 4454519 | 8289.03 |
| rhs element core protein | D9N32_RS24030 | Not Available | Positive | 4454767 - 4458906 | 155909.0 |
| hypothetical protein | D9N32_RS24035 | Not Available | Positive | 4458903 - 4459406 | 20010.7 |
| rhs repeat-associated core domain-containing protein | D9N32_RS24040 | Not Available | Positive | 4459459 - 4460076 | 23437.4 |
| tail fiber assembly protein | D9N32_RS24045 | Not Available | Positive | 4460184 - 4460951 | 29033.7 |
| ybga family protein | D9N32_RS24050 | Not Available | Positive | 4461093 - 4461602 | 20391.4 |
| deoxyribodipyrimidine photo-lyase | D9N32_RS24055 | Not Available | Positive | 4461599 - 4463017 | 53859.0 |
| dipeptide permease dtpd | D9N32_RS24060 | Not Available | Negative | 4463060 - 4464541 | 54116.1 |
| radiation resistance protein ybgi | D9N32_RS24065 | Not Available | Positive | 4464812 - 4465555 | 26894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





