Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1158 domain-containing protein | D9N32_RS23440 | Not Available | Negative | 4343935 - 4344183 | 9434.09 |
| ybdk family carboxylate-amine ligase | D9N32_RS23445 | Not Available | Negative | 4344249 - 4345367 | 41710.7 |
| tail fiber assembly protein | D9N32_RS28435 | Not Available | Negative | 4345572 - 4345839 | 9534.44 |
| type i toxin-antitoxin system toxin hoke | D9N32_RS23460 | Not Available | Positive | 4345808 - 4345960 | 5592.11 |
| tail fiber assembly protein | D9N32_RS28440 | Not Available | Negative | 4346095 - 4346343 | 9081.25 |
| type i toxin-antitoxin system toxin hoke | D9N32_RS23465 | Not Available | Positive | 4346312 - 4346464 | 5691.25 |
| enterobactin synthase subunit entd | D9N32_RS23470 | Not Available | Negative | 4346585 - 4347205 | 22991.6 |
| siderophore enterobactin receptor fepa | D9N32_RS23475 | Not Available | Negative | 4347380 - 4349620 | 82112.3 |
| enterochelin esterase | D9N32_RS23480 | Not Available | Positive | 4349863 - 4351065 | 45526.0 |
| enterobactin biosynthesis protein ybdz | D9N32_RS23485 | Not Available | Positive | 4351068 - 4351286 | 8229.54 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





