Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D9N32_RS23140 | Not Available | Negative | 4275224 - 4275589 | 13797.5 |
| trna 2-selenouridine(34) synthase mnmh | D9N32_RS23145 | Not Available | Negative | 4275705 - 4276799 | 41198.3 |
| hth-type transcriptional activator alls | D9N32_RS23150 | Not Available | Negative | 4276868 - 4277794 | 34513.6 |
| ureidoglycolate lyase | D9N32_RS23155 | Not Available | Positive | 4278024 - 4278506 | 18223.6 |
| hth-type transcriptional repressor allr | D9N32_RS23160 | Not Available | Positive | 4278584 - 4279399 | 29271.4 |
| glyoxylate carboligase | D9N32_RS23165 | Not Available | Positive | 4279489 - 4281270 | 64764.5 |
| hydroxypyruvate isomerase | D9N32_RS23170 | Not Available | Positive | 4281283 - 4282059 | 29357.0 |
| 2-hydroxy-3-oxopropionate reductase | D9N32_RS23175 | Not Available | Positive | 4282159 - 4283037 | 30787.5 |
| allantoin transporter | D9N32_RS23180 | Not Available | Positive | 4283207 - 4284661 | 52435.2 |
| allantoinase allb | D9N32_RS23185 | Not Available | Positive | 4284722 - 4286083 | 49549.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





