Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bapa-related adhesin siiea | D9N32_RS23035 | Not Available | Positive | 4233266 - 4254043 | 688836.0 |
| type i secretion system permease/atpase | D9N32_RS23040 | Not Available | Positive | 4254047 - 4256209 | 80719.7 |
| hlyd family efflux transporter periplasmic adaptor subunit | D9N32_RS23045 | Not Available | Positive | 4256206 - 4257381 | 43723.5 |
| cu(i)-responsive transcriptional regulator | D9N32_RS23050 | Not Available | Positive | 4257378 - 4257785 | 15236.0 |
| hypothetical protein | D9N32_RS28235 | Not Available | Negative | 4257789 - 4257992 | 7500.42 |
| hypothetical protein | D9N32_RS23060 | Not Available | Negative | 4257989 - 4258411 | 15261.2 |
| yada family autotransporter adhesin | D9N32_RS23065 | Not Available | Negative | 4258465 - 4259481 | 36118.6 |
| hypothetical protein | D9N32_RS23070 | Not Available | Positive | 4259848 - 4260210 | 14184.9 |
| nfed family protein | D9N32_RS23075 | Not Available | Negative | 4260395 - 4260853 | 16926.0 |
| spfh domain-containing protein | D9N32_RS23080 | Not Available | Negative | 4260850 - 4261767 | 33745.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





