Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D9N32_RS22830 | Not Available | Negative | 4188759 - 4189100 | 12916.3 |
| tail fiber assembly protein | D9N32_RS28230 | Not Available | Positive | 4189103 - 4189219 | 4263.95 |
| p-ii family nitrogen regulator | D9N32_RS22835 | Not Available | Positive | 4189400 - 4189738 | 12259.9 |
| ammonium transporter amtb | D9N32_RS22840 | Not Available | Positive | 4189768 - 4191054 | 44517.4 |
| acyl-coa thioesterase ii | D9N32_RS22845 | Not Available | Negative | 4191104 - 4191964 | 31961.2 |
| ybay family lipoprotein | D9N32_RS22850 | Not Available | Positive | 4192182 - 4192754 | 19442.3 |
| mgmt family protein | D9N32_RS22855 | Not Available | Negative | 4192785 - 4193096 | 11488.8 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 4193259 - 4193355 | Not Available |
| duf1428 domain-containing protein | D9N32_RS22865 | Not Available | Positive | 4193475 - 4193828 | 13318.9 |
| cyclic-guanylate-specific phosphodiesterase pdeb | D9N32_RS22870 | Not Available | Negative | 4193870 - 4195420 | 58814.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





