Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is200/is605-like element is200c family transposase | D9N32_RS22620 | Not Available | Positive | 4149691 - 4150149 | 18028.0 |
| hnh nuclease yajd | D9N32_RS22630 | Not Available | Positive | 4150336 - 4150683 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | D9N32_RS22635 | Not Available | Negative | 4150721 - 4151605 | 33590.6 |
| tail fiber assembly protein | D9N32_RS22640 | Not Available | Negative | 4151903 - 4152313 | 14726.6 |
| tail fiber assembly protein | D9N32_RS22645 | Not Available | Negative | 4152376 - 4152800 | 16298.0 |
| rna-guided endonuclease insq/tnpb family protein | D9N32_RS22650 | Not Available | Positive | 4152808 - 4153965 | 43952.8 |
| tail fiber assembly protein | D9N32_RS22655 | Not Available | Negative | 4154061 - 4154189 | 4884.01 |
| transcriptional regulator nrdr | D9N32_RS22660 | Not Available | Positive | 4154340 - 4154789 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | D9N32_RS22665 | Not Available | Positive | 4154793 - 4155896 | 40408.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | D9N32_RS22670 | Not Available | Positive | 4155985 - 4156455 | 16157.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





