Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltodextrin glucosidase | D9N32_RS22565 | Not Available | Positive | 4138974 - 4140791 | 69227.9 |
| tail fiber assembly protein | D9N32_RS22570 | Not Available | Positive | 4140977 - 4141507 | 20292.2 |
| is1 family transposase | D9N32_RS22575 | Not Available | Negative | 4141524 - 4142221 | 26631.4 |
| tail fiber assembly protein | D9N32_RS22580 | Not Available | Positive | 4142278 - 4143210 | 35617.8 |
| acp phosphodiesterase | D9N32_RS22585 | Not Available | Negative | 4143231 - 4143812 | 22943.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | D9N32_RS22590 | Not Available | Positive | 4144031 - 4145101 | 39435.0 |
| trna guanosine(34) transglycosylase tgt | D9N32_RS22595 | Not Available | Positive | 4145157 - 4146284 | 42596.1 |
| preprotein translocase subunit yajc | D9N32_RS22600 | Not Available | Positive | 4146307 - 4146639 | 11887.9 |
| protein translocase subunit secd | D9N32_RS22605 | Not Available | Positive | 4146667 - 4148514 | 66636.3 |
| protein translocase subunit secf | D9N32_RS22610 | Not Available | Positive | 4148525 - 4149496 | 35384.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





