Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogen peroxide resistance inhibitor ipra | D9N32_RS22415 | Not Available | Positive | 4110098 - 4110721 | 23930.0 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | D9N32_RS22420 | Not Available | Negative | 4110722 - 4111879 | 41865.5 |
| peptide antibiotic transporter sbma | D9N32_RS22430 | Not Available | Positive | 4112231 - 4113451 | 46447.9 |
| surface-exposed outer membrane lipoprotein yaiw | D9N32_RS22435 | Not Available | Positive | 4113464 - 4114558 | 40412.6 |
| yaiy family protein | D9N32_RS22440 | Not Available | Negative | 4114616 - 4114924 | 11425.2 |
| duf2754 domain-containing protein | D9N32_RS22445 | Not Available | Positive | 4115184 - 4115396 | 8097.92 |
| d-alanine--d-alanine ligase | D9N32_RS22450 | Not Available | Negative | 4115420 - 4116514 | 39318.0 |
| hypothetical protein | D9N32_RS22455 | Not Available | Positive | 4116592 - 4116795 | 8026.99 |
| anti-adapter protein irap | D9N32_RS22460 | Not Available | Positive | 4116977 - 4117237 | 9937.07 |
| alkaline phosphatase | D9N32_RS22465 | Not Available | Positive | 4117338 - 4118753 | 49433.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





