Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | D9N32_RS22365 | Not Available | Negative | 4098288 - 4098869 | 20773.3 |
| glycosyltransferase | D9N32_RS22370 | Not Available | Negative | 4098847 - 4100043 | 44645.9 |
| pig-l deacetylase family protein | D9N32_RS22375 | Not Available | Negative | 4100053 - 4100724 | 25041.2 |
| is1 family transposase | D9N32_RS22380 | Not Available | Negative | 4100908 - 4101605 | 26568.3 |
| taurine abc transporter substrate-binding protein | D9N32_RS22385 | Not Available | Positive | 4102110 - 4103072 | 34239.8 |
| taurine abc transporter atp-binding subunit | D9N32_RS22390 | Not Available | Positive | 4103085 - 4103852 | 28325.6 |
| taurine abc transporter permease tauc | D9N32_RS22395 | Not Available | Positive | 4103849 - 4104676 | 29567.6 |
| taurine dioxygenase | D9N32_RS22400 | Not Available | Positive | 4104673 - 4105524 | 32400.3 |
| porphobilinogen synthase | D9N32_RS22405 | Not Available | Negative | 4105564 - 4106538 | 35649.9 |
| autotransporter adhesin ehab | D9N32_RS22410 | Not Available | Positive | 4107064 - 4110012 | 105463.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





