Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase | D9N32_RS22315 | Not Available | Positive | 4089183 - 4090049 | 31939.3 |
| 2-keto-4-pentenoate hydratase | D9N32_RS22320 | Not Available | Positive | 4090059 - 4090868 | 28882.6 |
| acetaldehyde dehydrogenase | D9N32_RS22325 | Not Available | Positive | 4090865 - 4091815 | 33530.6 |
| 4-hydroxy-2-oxovalerate aldolase | D9N32_RS22330 | Not Available | Positive | 4091812 - 4092825 | 36442.6 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | D9N32_RS22335 | Not Available | Positive | 4093005 - 4094216 | 41627.6 |
| duf2058 domain-containing protein | D9N32_RS22340 | Not Available | Positive | 4094318 - 4094857 | 19937.9 |
| s-formylglutathione hydrolase | D9N32_RS22345 | Not Available | Negative | 4094982 - 4095815 | 31402.1 |
| s-(hydroxymethyl)glutathione dehydrogenase | D9N32_RS22350 | Not Available | Negative | 4095909 - 4097018 | 39335.2 |
| formaldehyde-responsive transcriptional repressor frmr | D9N32_RS22355 | Not Available | Negative | 4097053 - 4097328 | 10318.3 |
| yaio family outer membrane beta-barrel protein | D9N32_RS22360 | Not Available | Negative | 4097513 - 4098286 | 29058.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





