Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small membrane protein ykgr | D9N32_RS28430 | Not Available | Negative | 4017726 - 4017827 | 3999.01 |
| nadh-dependent flavin oxidoreductase | D9N32_RS22015 | Not Available | Negative | 4018300 - 4019442 | 41900.2 |
| alpha/beta hydrolase | D9N32_RS22020 | Not Available | Negative | 4019616 - 4020536 | 33235.6 |
| lysr family transcriptional regulator | D9N32_RS22025 | Not Available | Positive | 4020693 - 4021619 | 34333.5 |
| lysr family transcriptional regulator | D9N32_RS22030 | Not Available | Positive | 4021819 - 4022712 | 33314.2 |
| aldo/keto reductase | D9N32_RS22035 | Not Available | Negative | 4022743 - 4023732 | 36215.5 |
| aldo/keto reductase | D9N32_RS22040 | Not Available | Negative | 4023759 - 4024610 | 31911.2 |
| inverse autotransporter adhesin fdec | D9N32_RS22045 | Not Available | Positive | 4025176 - 4029426 | 149657.0 |
| helix-turn-helix domain-containing protein | D9N32_RS22055 | Not Available | Negative | 4029551 - 4030408 | 33882.7 |
| aldo/keto reductase | D9N32_RS22060 | Not Available | Positive | 4030657 - 4031526 | 32763.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





