Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | D9N32_RS21955 | Not Available | Negative | 4008448 - 4008777 | 11799.1 |
| fimbrial chaperone ecpe | D9N32_RS21960 | Not Available | Negative | 4009091 - 4009801 | 26660.7 |
| fimbrial adhesin ecpd | D9N32_RS21965 | Not Available | Negative | 4009770 - 4011413 | 59862.0 |
| fimbrial usher ecpc | D9N32_RS21970 | Not Available | Negative | 4011403 - 4013928 | 91286.7 |
| fimbrial chaperone ecpb | D9N32_RS21975 | Not Available | Negative | 4013954 - 4014622 | 24521.3 |
| common pilus major fimbrillin subunit ecpa | D9N32_RS21980 | Not Available | Negative | 4014680 - 4015267 | 20082.4 |
| ecp biosynthesis operon dna-binding transcriptional regulator ecpr | D9N32_RS21985 | Not Available | Negative | 4015342 - 4015884 | 21200.7 |
| tail fiber assembly protein | D9N32_RS21995 | Not Available | Positive | 4016708 - 4016933 | 8426.11 |
| type b 50s ribosomal protein l36 | D9N32_RS22000 | Not Available | Negative | 4016968 - 4017108 | 5466.94 |
| type b 50s ribosomal protein l31 | D9N32_RS22005 | Not Available | Negative | 4017108 - 4017371 | 9920.71 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





